ale/doc/user/exclusion/index.xml
2022-07-30 14:46:04 -03:00

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<?xml version="1.0"?>
<!DOCTYPE book PUBLIC "-//Norman Walsh//DTD DocBk XML V3.1.4//EN"
"file:///usr/share/xml/docbook/schema/dtd/4.4/docbookx.dtd">
<chapter id="user-exclusion"><title>Exclusion Regions</title>
<p>ALE offers exclusion regions as a way to disallow certain areas from being
used in alignment and (optionally) rendering. Spatial coordinates are
expressed in the rendering coordinate system (prior to scaling). In cases
where the default transformation is used with the original frame, this is
identical to the unscaled original frame coordinate system, taking the
upper-left corner to be (0, 0). Frame numbering begins with 0, which represents
the original frame.</p>
<s><t>Rectangular Exclusion</t>
<p>All specified volumes are excluded from alignment (except where they affect
the alignment reference image), and are excluded from rendering by default.
(See <xref linkend="user-chains"/> for information on how to ignore exclusion
regions.) Exclusion region syntax is as follows:</p>
<ll>--ex &lt;args&gt; Exclude a specified volume.
&lt;args&gt; are space-delimited horizontal,
vertical, and frame limits:
&lt;xmin&gt; &lt;xmax&gt; &lt;ymin&gt; &lt;ymax&gt; &lt;fmin&gt; &lt;fmax&gt;
</ll>
</s><s><t>Cropping</t>
<p>Cropping excludes the spatial complement of an area over a specified set of
frames.</p>
<ll>--crop &lt;args&gt; Exclude the spatial complement of an area over a
specified set of frames. &lt;args&gt; are:
&lt;xmin&gt; &lt;xmax&gt; &lt;ymin&gt; &lt;ymax&gt; &lt;fmin&gt; &lt;fmax&gt;
</ll>
</s>
</chapter>